Alignment

ALIGN_DOWN

ALIGN_DOWN Description Aligns the given value down to the nearest multiple of alignment.

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ALIGN_DOWN_POW2

ALIGN_DOWN_POW2 Description Aligns the given value down to the nearest power-of-two multiple.

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ALIGN_UP

ALIGN_UP Description Aligns the given value up to the nearest multiple of alignment.

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ALIGN_UP_POW2

ALIGN_UP_POW2 Description Aligns the given value up to the nearest power-of-two multiple.

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BitVecAlignmentScore

BitVecAlignmentScore Description Calculate alignment score between two bitvectors. Used in bioinformatics-style sequence alignment with match/mismatch scoring.

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BitVecBestAlignment

BitVecBestAlignment Description Find best overlapping alignment between two bitvectors. Returns the offset that gives the best alignment score.

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